Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGACTGCCCTGATCTGGAGA&CTCCAGATGTAGACCT
.((.((((....((((((((.&)))))))))))).)).
Details
MiRNAhsa-miR-1288-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site755,771
Score0.923
Seed0
Au0.603
Energy-17.7
Binding len16
Me-15.296
Phylopstem4.95922
Phylopflank4.167572428749999
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure