Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGACTGCCCTGATCTGGAGA&TCGGATTGGGTGTGGTG
...(((((((((((((((...&)))))))))).))))).
Details
MiRNAhsa-miR-1288-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1173,1190
Score0.846
Seed0
Au0.529
Energy-17.8
Binding len17
Me-6.515
Phylopstem3.3938066250000007
Phylopflank3.92666918375
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure