Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGACTGCCCTGATCTGGAGA&CAGATCACTGGGCTGCAGATGGTTGGA
(.(((((((((((((((....&)))))))..)))).......)))).).
Details
MiRNAhsa-miR-1288-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1427,1454
Score0.846
Seed1
Au0.603
Energy-17.6
Binding len27
Me-5.101
Phylopstem4.005641541666667
Phylopflank2.7216619025
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end4
PositionCDS
2D Structure