Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGCGCCCCGGCTCCCGTTC&GAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGT
((((((((((((((((((((&))))))))..........................)))))....))))))).
Details
MiRNAhsa-miR-1292-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1138,1189
Score0.923
Seed1
Au0.515
Energy-23.4
Binding len51
Me-3.938
Phylopstem2.8054922799999997
Phylopflank4.596586457500001
Longest consecutive pairings8
Position of longest consecutive pairings43
Pairings in 3prime end8
PositionCDS
2D Structure