Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGACCGGACCTCGACCGGCT&GCCGGCGGGACTGGTCT
..((((((.((.((.(((((.&))))))))).)))))).
Details
MiRNAhsa-miR-1307-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site21,38
Score0.846
Seed1
Au0.313
Energy-26.3
Binding len17
Me-10.096
Phylopstem-0.11739166666666667
Phylopflank0.4340942153571429
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure