Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTCGGCGTGGCGTCGGTCGTG&CGCGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGA
.(((.(((((.((.((((((((&)))))))).)).).................)))).))).
Details
MiRNAhsa-miR-1307-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site14,53
Score0.846
Seed0
Au0.324
Energy-24.2
Binding len39
Me-11.594
Phylopstem0.536429075
Phylopflank0.15841988000000007
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end8
Position5UTR
2D Structure