Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCTCAAGGAGGTGTCGTTTAT&GTAAACAAAGGAAGCCTCCTAGAGGAT
(((((.(((((((.((.(((..&.))).)).))))))).))))).
Details
MiRNAhsa-miR-513c-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site862,889
Score0.846
Seed0
Au0.559
Energy-21.8
Binding len22
Me-6.695
Phylopstem6.433127142857144
Phylopflank4.68675196875
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure