Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGCCCGGGCTGCTGCTGTTCCT&AATGGCAGCTGCTGAAGGGCA
..((((.(((.(((((((((...&))))))))).)))...)))).
Details
MiRNAhsa-miR-1538
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1506,1527
Score0.846
Seed0
Au0.574
Energy-24.1
Binding len21
Me-9.325
Phylopstem3.4272256666666667
Phylopflank3.0014904475
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure