Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCTGCGCGTCCCAGATGCCC&GGGCACCCATGGCTTTGGTTGATTTATCTTGTGACAGCAGGAG
((((((..(((((((((((((&)))))........)))))..............))).)))))).
Details
MiRNAhsa-miR-1539
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1522,1565
Score0.846
Seed0
Au0.618
Energy-21.4
Binding len43
Me-7.795
Phylopstem3.6475748914285715
Phylopflank3.70278641
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure