Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCAGTGCCCTCCTCTCC&GAGAGGGATGTTTGGCATTGT
..(((((((.(((((((.&)))))))......))))))).
Details
MiRNAhsa-miR-1825
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1980,2001
Score0.846
Seed1
Au0.632
Energy-18.6
Binding len21
Me-6.2
Phylopstem4.0300775714285715
Phylopflank3.676487712500001
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure