Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGTGCCGGTGCCTGCCCTG&GGGAGGCACCTCAGATTCT
.((((...(((((((.(((..&))))))))))....)))).
Details
MiRNAhsa-miR-1909-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1142,1161
Score1.0
Seed0
Au0.485
Energy-21.9
Binding len19
Me-9.785
Phylopstem2.1205194285714284
Phylopflank3.8584471562499996
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure