Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGTGCCGGTGCCTGCCCTG&GGCGGGACTGGTCTGAA
(.((.((((((.((((((...&)))))))))))))).).
Details
MiRNAhsa-miR-1909-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site24,41
Score0.846
Seed0
Au0.324
Energy-21.1
Binding len17
Me-12.567
Phylopstem0.1619102166666666
Phylopflank0.3035568932142858
Longest consecutive pairings14
Position of longest consecutive pairings3
Pairings in 3prime end5
Position5UTR
2D Structure