Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGTACCGCCATGTCTGTTGGG&CCAATGGACCTGGAAGAGGAAAAAAAGCAAAATGATGGTGAAATGCTTG
.(((((.(((((((((((((((.&))))))))).........................))))))...))))).
Details
MiRNAhsa-miR-1911-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1717,1766
Score1.0
Seed0
Au0.632
Energy-19.5
Binding len49
Me-5.337
Phylopstem3.0197907499999994
Phylopflank3.7289827125000006
Longest consecutive pairings9
Position of longest consecutive pairings40
Pairings in 3prime end7
PositionCDS
2D Structure