Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGGCCAGGCACAGTGGCTCA&GGCCGCCGGCGGGACTGGTCTGAA
(((((((((((.(.((((((..&)))))).)))....))))))))).
Details
MiRNAhsa-miR-1972
RefseqIDNM_004362
GeneSymbolCLGN
Binding site17,41
Score0.846
Seed1
Au0.324
Energy-25.4
Binding len24
Me-8.141
Phylopstem0.04257298666666666
Phylopflank0.3999523108333334
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure