Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGGCCAGGCACAGTGGCTCA&GCCCAAATAGAAGATTCAAGTGTTGTTAAACCTGCTGGCTGGCTTGAT
((((((((.((.((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-1972
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1021,1069
Score0.877
Seed1
Au0.603
Energy-22.4
Binding len18
Me-8.341
Phylopstem6.277526249999999
Phylopflank4.630597943749999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure