Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCCTGCCCTCCTTGCTGT&ATAGTGGAAGGTTGGCTGGATGGG
(((((.(((..(((((((((&)))))..))))..))).))).)).
Details
MiRNAhsa-miR-1976
RefseqIDNM_004362
GeneSymbolCLGN
Binding site320,344
Score0.846
Seed0
Au0.603
Energy-19.6
Binding len24
Me-9.906
Phylopstem1.5289988181818182
Phylopflank2.5615032274999994
Longest consecutive pairings5
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure