Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCCCATGCCAAGAACTCCC&GGAAGGTTGGCTGGATGGG
((..(((.(((((....(((.&)))...))))))))..)).
Details
MiRNAhsa-miR-2116-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site325,344
Score1.0
Seed0
Au0.603
Energy-17.0
Binding len19
Me-12.666
Phylopstem3.204132
Phylopflank2.2194814774999996
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure