Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCGCGGGCTGAGCGCTGCCAGTC&TGGCAGCTGCTGAAGGGCACCCATGGCTT
(((..(((((.((((((((((...&))))))).))).)...)).))....))).
Details
MiRNAhsa-miR-2277-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1508,1537
Score0.923
Seed0
Au0.529
Energy-22.8
Binding len29
Me-13.913
Phylopstem3.423436272727273
Phylopflank2.9436486100000003
Longest consecutive pairings7
Position of longest consecutive pairings22
Pairings in 3prime end5
PositionCDS
2D Structure