Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGAGCAGTGTGTGTTGCCTGG&CTAGCAACATTATATTCTTTCA
(((((.(((((((((((.((((&)))))))))).)))))))))).
Details
MiRNAhsa-miR-2278
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2058,2080
Score1.0
Seed0
Au0.706
Energy-17.7
Binding len22
Me-5.839
Phylopstem3.71363575
Phylopflank3.0425966575
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure