Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGCAGTGACTGTTCAGACGTC&GACGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
..(((((((((.(((((((.(((&.))).))))))).))))))))).
Details
MiRNAhsa-miR-2682-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site43,93
Score0.846
Seed1
Au0.515
Energy-32.2
Binding len23
Me-8.304
Phylopstem0.26770777777777766
Phylopflank0.38503485875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure