Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATAGGACTCATATAGTGCCAG&TTGGCTATGTTTGGGTCTTC
..((((((((.(((..(((((&)))))..))).)))))))).
Details
MiRNAhsa-miR-3117-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site138,158
Score0.923
Seed1
Au0.647
Energy-18.7
Binding len20
Me-8.75
Phylopstem1.758551875
Phylopflank0.862947335
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure