Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATAGGACTCATATAGTGCCAG&TTGGCTGGATGGGTCTTATC
(((((((((((.....(((((&)))))...))))))))))).
Details
MiRNAhsa-miR-3117-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site331,351
Score1.0
Seed1
Au0.588
Energy-18.1
Binding len20
Me-10.399
Phylopstem3.3168419090909094
Phylopflank2.1019112999999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure