Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGACAGATGCCAGAAGCA&CTTTTGGCTATGTTTGGGTCTTCTGTTCATCTCAA
(((((((((((.((((((((..&)))))))).............)))))))..)))).
Details
MiRNAhsa-miR-3126-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site135,170
Score0.923
Seed1
Au0.647
Energy-19.1
Binding len35
Me-7.284
Phylopstem2.0596718461538464
Phylopflank1.22203420125
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end6
PositionCDS
2D Structure