Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCTGGCATCCGTCACACAGA&GTGGAAGGTTGGCTGGATGG
((((((((..((.((.(((...&))))).))...)))))))).
Details
MiRNAhsa-miR-3126-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site323,343
Score0.904
Seed1
Au0.618
Energy-18.3
Binding len20
Me-7.759
Phylopstem4.45732125
Phylopflank2.1900889625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure