Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCCCTTCTGCAGGCCTGCTGG&CGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGAC
(((((((((.((((((((((((&.)))))).....)))))).))))....))))).
Details
MiRNAhsa-miR-3127-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site16,54
Score0.846
Seed1
Au0.338
Energy-26.8
Binding len33
Me-5.18
Phylopstem0.1925291117647059
Phylopflank0.2869621260714287
Longest consecutive pairings6
Position of longest consecutive pairings26
Pairings in 3prime end8
Position5UTR
2D Structure