Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACCCAGTCTCCGGTGCAGCC&GGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGT
((((((((((..(((((..((&))..))))).......................)))))))))).
Details
MiRNAhsa-miR-3130-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1143,1186
Score0.846
Seed1
Au0.529
Energy-22.2
Binding len43
Me-10.109
Phylopstem2.9578134
Phylopflank3.7876864462500004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure