Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGAGGACTGGTGGAAGGGCCTT&GCCTTTTGGCTATGTTTGGGTCTTCT
..((((((((((.(((((((...&))))))).))).......))))))).
Details
MiRNAhsa-miR-3131
RefseqIDNM_004362
GeneSymbolCLGN
Binding site133,159
Score0.846
Seed1
Au0.632
Energy-21.2
Binding len26
Me-6.246
Phylopstem1.2626520176470588
Phylopflank0.7497942725
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end5
PositionCDS
2D Structure