Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGACTGAATAGGTAGGGTCATT&ATGCCAGACCTGAACTTTAATCAGTCT
..((((((..((((.(((((...&.)))))..))))...)))))).
Details
MiRNAhsa-miR-3136-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2011,2038
Score0.923
Seed1
Au0.618
Energy-18.4
Binding len22
Me-7.991
Phylopstem3.5833399999999997
Phylopflank3.272248395
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure