Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGAGGTTGTGCATTTCTAA&TGCGCGGCCGCCGGC
.((.(.(((((((((.......&))))))))).).)).
Details
MiRNAhsa-miR-544b
RefseqIDNM_004362
GeneSymbolCLGN
Binding site12,27
Score0.846
Seed0
Au0.286
Energy-17.1
Binding len15
Me-8.959
Phylopstem0.3100250444444444
Phylopflank-0.07866936999999996
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end1
Position5UTR
2D Structure