Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAAAAGTGATCGTGGTTTTTG&AAAACCATTCATTTTTGC
(((((((((..((((((((..&))))))))))))))))).
Details
MiRNAhsa-miR-548t-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site501,519
Score1.0
Seed1
Au0.676
Energy-15.1
Binding len18
Me-8.005
Phylopstem5.346519333333333
Phylopflank5.234187403749999
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure