Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGCGGGTGGAGGAGGA&TCCTGATCCTTCTGCCGTCA
((.((((((.(((..((((&))))..))).)))))).)).
Details
MiRNAhsa-miR-3141
RefseqIDNM_004362
GeneSymbolCLGN
Binding site972,992
Score0.923
Seed0
Au0.544
Energy-23.7
Binding len20
Me-8.33
Phylopstem4.6143955000000005
Phylopflank4.852802893750001
Longest consecutive pairings6
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure