Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGCCTTTCTGAACCTTCAGA&GAAGGTTGGCTGGATGGGTCTTA
(((((((.(((((((((((...&)))))))...)))).))))))).
Details
MiRNAhsa-miR-3142
RefseqIDNM_004362
GeneSymbolCLGN
Binding site326,349
Score0.923
Seed1
Au0.603
Energy-20.4
Binding len23
Me-6.251
Phylopstem3.1461095
Phylopflank2.2635702775
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure