Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACTCCAAACACTCAAAACTCA&AGTTTTAGTTGTTTGGAGA
..(((((((((((.((((((..&))))))))).)))))))).
Details
MiRNAhsa-miR-3145-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2209,2228
Score0.923
Seed1
Au0.721
Energy-17.6
Binding len19
Me-5.814
Phylopstem3.615611166666667
Phylopflank3.81685624125
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure