Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTGTATGGATATGTGTGTGTAT&GTGCATACATTAAACTCCTAGCAGAC
(((((..(((...((((((((((&)))))))))).....)))..))))).
Details
MiRNAhsa-miR-3149
RefseqIDNM_004362
GeneSymbolCLGN
Binding site578,604
Score0.846
Seed0
Au0.647
Energy-17.0
Binding len26
Me-14.843
Phylopstem5.838299000000001
Phylopflank5.652569885000001
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure