Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCCACTTCCAGATCTTTCT&AGAAAGATGACATGGATGAGGAAATTTCAATATACGATGGAAGATGGGAA
.(((((((((((.((((((((&)))))))).............................)))))).))))).
Details
MiRNAhsa-miR-3156-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site359,409
Score0.846
Seed1
Au0.632
Energy-20.0
Binding len50
Me-5.082
Phylopstem2.5468070833333334
Phylopflank2.2849467087500006
Longest consecutive pairings8
Position of longest consecutive pairings42
Pairings in 3prime end8
PositionCDS
2D Structure