Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGCTTCCTCTCTGCAGGAC&GTTCTTTACAGACAGGAAGACTCA
..(((((((((.((((.(((((&)))))...)))).)))))).))).
Details
MiRNAhsa-miR-3158-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site777,801
Score0.846
Seed1
Au0.632
Energy-20.2
Binding len24
Me-8.304
Phylopstem3.7621726100000004
Phylopflank4.570504206250002
Longest consecutive pairings6
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure