Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGCTTCCTCTCTGCAGGAC&CCTGATGACTGGAATGAAGACACGGATGGAGAATGGGAGGCACCTC
.(((((((((((((((((((..&))))......................))))))...)))))).))).
Details
MiRNAhsa-miR-3158-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1108,1154
Score0.846
Seed1
Au0.5
Energy-20.1
Binding len46
Me-3.793
Phylopstem3.358708935555554
Phylopflank3.8357769437500004
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure