Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGCTTTCTAGTCTCAGCTCTCC&GAGAGCACAGGATCTGGAGATGGGCCG
(((((((((((((..((((((.&))))))...))).))))))...)))).
Details
MiRNAhsa-miR-3160-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1888,1915
Score0.846
Seed1
Au0.529
Energy-23.2
Binding len27
Me-5.53
Phylopstem2.188096999999999
Phylopflank4.574920850000002
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure