Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGATAAGAACAGAGGCCCAGAT&GTTTGGGTCTTCTGTTCATCTCAA
.(((...((((((((((((((((&)))))))))).))))))...))).
Details
MiRNAhsa-miR-3161
RefseqIDNM_004362
GeneSymbolCLGN
Binding site146,170
Score0.923
Seed0
Au0.647
Energy-24.1
Binding len24
Me-11.357
Phylopstem1.4638416058823533
Phylopflank0.90660257125
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure