Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGATTTCAGAAATACTGGTGT&CACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCTC
(((((((((((....((((((.&.))))))....))))))))))).
Details
MiRNAhsa-miR-3167
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1244,1286
Score0.846
Seed1
Au0.618
Energy-21.1
Binding len23
Me-10.166
Phylopstem3.3160414545454544
Phylopflank4.19818582625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure