Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGGACTGTGCTTGGCACATAG&TGCCAGACCTGAACTTTAATCAGTCTGCACATCCTGT
(((((.(((((((((((.....&))))))....................)))))))))).
Details
MiRNAhsa-miR-3169
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2012,2049
Score0.846
Seed0
Au0.647
Energy-17.2
Binding len37
Me-5.839
Phylopstem2.85618470967742
Phylopflank3.935145662499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure