Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAGGAGGAAATAGGCAGGCCA&GCCTCCTAGAGGATGTGGTTCCTCCTA
..((((((((.((((.((((..&))))))))..........)))))))).
Details
MiRNAhsa-miR-3173-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site875,902
Score0.808
Seed1
Au0.559
Energy-20.8
Binding len27
Me-8.015
Phylopstem5.4903525
Phylopflank4.91290573
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end5
PositionCDS
2D Structure