Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGGCCTGGGACTACCGG&CTGGTAGTTCTAT
.......((((((((((((&)))))))))))).
Details
MiRNAhsa-miR-3176
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2330,2343
Score0.872
Seed0
Au0.721
Energy-16.7
Binding len13
Me-17.11
Phylopstem5.385232166666667
Phylopflank4.49780429625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure