Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCGGAGCTTCCGGAGGCC&GCCTCCTAGAGGATGTGGTTCCTCCTAT
(((((.(((((((((((((((.&))))))....)))...))))))))))).
Details
MiRNAhsa-miR-3180-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site875,903
Score0.846
Seed0
Au0.559
Energy-26.3
Binding len28
Me-5.839
Phylopstem4.483776772727272
Phylopflank4.86026604375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure