Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCGGGCCCTCGGCGCCGG&CCGGCGGGACTGGTCTGAA
.(((((((.....((((((&)))))).....))))))).
Details
MiRNAhsa-miR-3181
RefseqIDNM_004362
GeneSymbolCLGN
Binding site22,41
Score0.923
Seed1
Au0.324
Energy-22.7
Binding len19
Me-13.553
Phylopstem-0.06479477142857146
Phylopflank0.4265577714130435
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure