Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAAGAAGGCGGTCGGTCTGCGG&CTGCTGCGCGGCCGCCGGCG
....(..((((((((..(.((((&)))).)..))))))))..).
Details
MiRNAhsa-miR-3185
RefseqIDNM_004362
GeneSymbolCLGN
Binding site8,28
Score0.923
Seed0
Au0.298
Energy-23.5
Binding len20
Me-13.224
Phylopstem0.74590545
Phylopflank0.17651096333333338
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
Position5UTR
2D Structure