Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGGGCAGCGTGTGGCTGAAGG&CCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCAA
..(((((((..((((((.(((((&))))).)))).))...........................))))))).
Details
MiRNAhsa-miR-3187-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site979,1027
Score0.872
Seed1
Au0.574
Energy-23.3
Binding len48
Me-9.024
Phylopstem4.764165285714286
Phylopflank4.9965824125000005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure