Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGGCTTTGTGCGGATACGGGG&GTCTGCACATCCTGTTTCTA
((((((..(((((((((......&)))))))))....)))))).
Details
MiRNAhsa-miR-3188
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2034,2054
Score1.0
Seed0
Au0.647
Energy-18.8
Binding len20
Me-7.795
Phylopstem1.3392966666666668
Phylopflank3.726666752500001
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end2
Position3UTR
2D Structure