Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCCCATCTGTGCCCTGGGTAGGA&CTGCTGAAGGGCACCCATGGCTTTGGTT
.(((((((..(((((((.(((((..&)))))..)))))))..))))....))).
Details
MiRNAhsa-miR-3189-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1514,1542
Score1.0
Seed1
Au0.5
Energy-25.3
Binding len28
Me-6.092
Phylopstem4.6838117142857145
Phylopflank3.241493065
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure