Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCCCATCTGTGCCCTGGGTAGGA&TCTGTTCGGAAAAGGAAGTAGCAGATCACTGGGCTGCAGATGGTTGGA
..((((((((((((((.((((....&.))).).)))).))))))))..)).
Details
MiRNAhsa-miR-3189-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1406,1454
Score1.0
Seed1
Au0.603
Energy-23.5
Binding len25
Me-4.957
Phylopstem3.0495842352941174
Phylopflank3.0749648625
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure